Structural features and development of an assay platform of the parasite target deoxyhypusine synthase of Brugia malayi and Leishmania major

PLoS Negl Trop Dis. 2020 Oct 12;14(10):e0008762. doi: 10.1371/journal.pntd.0008762. eCollection 2020 Oct.

Abstract

Deoxyhypusine synthase (DHS) catalyzes the first step of the post-translational modification of eukaryotic translation factor 5A (eIF5A), which is the only known protein containing the amino acid hypusine. Both proteins are essential for eukaryotic cell viability, and DHS has been suggested as a good candidate target for small molecule-based therapies against eukaryotic pathogens. In this work, we focused on the DHS enzymes from Brugia malayi and Leishmania major, the causative agents of lymphatic filariasis and cutaneous leishmaniasis, respectively. To enable B. malayi (Bm)DHS for future target-based drug discovery programs, we determined its crystal structure bound to cofactor NAD+. We also reported an in vitro biochemical assay for this enzyme that is amenable to a high-throughput screening format. The L. major genome encodes two DHS paralogs, and attempts to produce them recombinantly in bacterial cells were not successful. Nevertheless, we showed that ectopic expression of both LmDHS paralogs can rescue yeast cells lacking the endogenous DHS-encoding gene (dys1). Thus, functionally complemented dys1Δ yeast mutants can be used to screen for new inhibitors of the L. major enzyme. We used the known human DHS inhibitor GC7 to validate both in vitro and yeast-based DHS assays. Our results show that BmDHS is a homotetrameric enzyme that shares many features with its human homologue, whereas LmDHS paralogs are likely to form a heterotetrameric complex and have a distinct regulatory mechanism. We expect our work to facilitate the identification and development of new DHS inhibitors that can be used to validate these enzymes as vulnerable targets for therapeutic interventions against B. malayi and L. major infections.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Anthelmintics / chemistry
  • Anthelmintics / pharmacology*
  • Antiprotozoal Agents / chemistry
  • Antiprotozoal Agents / pharmacology*
  • Brugia malayi / drug effects*
  • Brugia malayi / enzymology
  • Brugia malayi / genetics
  • Brugia malayi / growth & development
  • Drug Evaluation, Preclinical
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / pharmacology*
  • Helminth Proteins / antagonists & inhibitors*
  • Helminth Proteins / chemistry
  • Helminth Proteins / genetics
  • Helminth Proteins / metabolism
  • High-Throughput Screening Assays
  • Leishmania major / drug effects*
  • Leishmania major / enzymology
  • Leishmania major / genetics
  • Leishmania major / growth & development
  • Oxidoreductases Acting on CH-NH Group Donors / antagonists & inhibitors*
  • Oxidoreductases Acting on CH-NH Group Donors / chemistry
  • Oxidoreductases Acting on CH-NH Group Donors / genetics
  • Oxidoreductases Acting on CH-NH Group Donors / metabolism
  • Protozoan Proteins / antagonists & inhibitors*
  • Protozoan Proteins / chemistry
  • Protozoan Proteins / genetics
  • Protozoan Proteins / metabolism
  • Sequence Alignment

Substances

  • Anthelmintics
  • Antiprotozoal Agents
  • Enzyme Inhibitors
  • Helminth Proteins
  • Protozoan Proteins
  • Oxidoreductases Acting on CH-NH Group Donors
  • deoxyhypusine synthase

Grants and funding

This work was supported by the National Council for Scientific and Technological Development (CNPq, Brazil), Grants no. 465651/2014-3 and 303757/2017-5; São Paulo Research Foundation (FAPESP, Brazil), Grants no. 2015/03553-6, 2016/16970-7, 2013/50724-5 and 2014/50897-0. This study was supported in part by the Coordination for the Improvement of Higher Education Personnel (CAPES, Brazil) – Finance code 001 and Scientific Development Support Program – PADC- FCFAr, UNESP. S.F.S. received CNPq PhD fellowship (141241/2019-5). A.H.K. received CAPES PhD fellowship (8887.161266/2017-00) and is also the recipient of a FAPESP PhD fellowship (2018/16672-1). A.S.S. and P.Z.R. received CAPES postdoctoral fellowship (88887.136342/2017-00 and 88887.136432/2017-00, respectively), A.S.S. is also the recipient of a FAPESP post-doctoral fellowship (2019/14275-8). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.