Manually curated and harmonised transcriptomics datasets of psoriasis and atopic dermatitis patients

Sci Data. 2020 Oct 13;7(1):343. doi: 10.1038/s41597-020-00696-8.


We present manually curated transcriptomics data of psoriasis and atopic dermatitis patients retrieved from the NCBI Gene Expression Omnibus and EBI ArrayExpress repositories. We collected 39 transcriptomics datasets, deriving from DNA microarrays and RNA-Sequencing technologies, for a total of 1677 samples. We provide quality-checked, homogenised and preprocessed gene expression matrices and their corresponding metadata tables along with the estimated surrogate variables. These data represent a ready-made valuable source of knowledge for translational researchers in the dermatology field.

Publication types

  • Dataset
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Data Curation
  • Dermatitis, Atopic / genetics*
  • Humans
  • Metadata
  • Oligonucleotide Array Sequence Analysis
  • Psoriasis / genetics*
  • Sequence Analysis, RNA
  • Transcriptome*