Transcriptomic Profiling of Various Developmental Stages of Aphis Aurantii to Provide a Genetic Resource for Gene Expression and SSR Analysis

doi:10.3389/fphys.2020.578939

. 2020 Sep 18:11:578939.

doi: 10.3389/fphys.2020.578939. eCollection 2020.

Transcriptomic Profiling of Various Developmental Stages of Aphis Aurantii to Provide a Genetic Resource for Gene Expression and SSR Analysis

Feng Hong^{1

2}, Si-Hua Mo^{2

3}, Yinghong Liu², Dong Wei^{2

3}

Affiliations

¹ College of Agriculture, Xinyang Agriculture and Forestry University, Xinyang, China.
² Chongqing Key Laboratory of Entomology and Pest Control Engineering, College of Plant Protection, Southwest University, Chongqing, China.
³ State Cultivation Base of Crop Stress Biology for Southern Mountainous Land, Academy of Agricultural Sciences, Southwest University, Chongqing, China.

PMID: 33071832
PMCID: PMC7530277
DOI: 10.3389/fphys.2020.578939

Transcriptomic Profiling of Various Developmental Stages of Aphis Aurantii to Provide a Genetic Resource for Gene Expression and SSR Analysis

Feng Hong et al. Front Physiol. 2020.

. 2020 Sep 18:11:578939.

doi: 10.3389/fphys.2020.578939. eCollection 2020.

Authors

Feng Hong^{1

2}, Si-Hua Mo^{2

3}, Yinghong Liu², Dong Wei^{2

3}

Affiliations

¹ College of Agriculture, Xinyang Agriculture and Forestry University, Xinyang, China.
² Chongqing Key Laboratory of Entomology and Pest Control Engineering, College of Plant Protection, Southwest University, Chongqing, China.
³ State Cultivation Base of Crop Stress Biology for Southern Mountainous Land, Academy of Agricultural Sciences, Southwest University, Chongqing, China.

PMID: 33071832
PMCID: PMC7530277
DOI: 10.3389/fphys.2020.578939

No abstract available

Keywords: molting; simple sequence repeats; tea aphid; transcriptome; wing dimorphism.

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Figures

**Figure 1**
Gene expression during developmental stages in *Aphis aurantii*. **(A)** Venn diagram of differentially expressed genes during developmental stages of wingless aphids. **(B)** Volcano plot of gene expression between wingless 4th instar nymphs and wingless adults. **(C)** Volcano plot of gene expression between wingless and winged adults. **(D)** An example of gene expression in all stages. N1, N2, N3, and N4 indicates the 1st-, 2nd-, 3rd-, 4th-instar nymph respectively. AW and AY indicates wingless and winged adults respectively.

**Figure 2**
SSRs identified in *Aphis aurantii*. **(A)** Number of SSRs of different types. **(B)** SSR repeats of each type. **(C)** The top 14 SSRs, of which there were more than 100 each.

See this image and copyright information in PMC

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References

1. Alizadeh Kafeshani F., Rajabpour A., Aghajanzadeh S., Gholamian E., Farkhari M. (2018). Spatial distribution and sampling plans with fixed level of precision for citrus aphids (Hom., Aphididae) on two orange species. J. Econ. Entomol. 111, 931–941. 10.1093/jee/tox380 - DOI - PubMed
1. Aslam S., Hamid F. S., Waheed A., Aslam N., Ahmed F., Zaman Q., et al. (2015). Field evaluation of different chemical pesticides against aphid Toxoptera aurantii on different tea (Camellia sinensis L.) cuttings under high shade nursery. Moroccan J. Chem. 3, 127–135.
1. Benjamini Y., Hochberg Y. (1995). Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. Royal Statal Soc. 57, 289–300. 10.1111/j.2517-6161.1995.tb02031.x - DOI
1. Carver M. (1978). The black citrus aphids, Toxoptera citricidus (Kirkaldy) and Toxoptera aurantii (Boyer de Fonscolombe) (Homoptera: Aphididae). J. Aust. Entomol. Soc. 17, 263–270. 10.1111/j.1440-6055.1978.tb00156.x - DOI
1. Deng J., Liu Q., Yu Y. H., Li J. J., Huang X. L. (2019). The detection and midgut intracellular location of Rickettsia symbiont in the camellia aphid (Aphis Aurantii). Appl. Ecol. Env.l Res. 17, 12203–12212. 10.15666/aeer/1705_1220312212 - DOI

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[1] Alizadeh Kafeshani F., Rajabpour A., Aghajanzadeh S., Gholamian E., Farkhari M. (2018). Spatial distribution and sampling plans with fixed level of precision for citrus aphids (Hom., Aphididae) on two orange species. J. Econ. Entomol. 111, 931–941. 10.1093/jee/tox380 - DOI - PubMed

[2] Alizadeh Kafeshani F., Rajabpour A., Aghajanzadeh S., Gholamian E., Farkhari M. (2018). Spatial distribution and sampling plans with fixed level of precision for citrus aphids (Hom., Aphididae) on two orange species. J. Econ. Entomol. 111, 931–941. 10.1093/jee/tox380 - DOI - PubMed

[3] Aslam S., Hamid F. S., Waheed A., Aslam N., Ahmed F., Zaman Q., et al. (2015). Field evaluation of different chemical pesticides against aphid Toxoptera aurantii on different tea (Camellia sinensis L.) cuttings under high shade nursery. Moroccan J. Chem. 3, 127–135.

[4] Aslam S., Hamid F. S., Waheed A., Aslam N., Ahmed F., Zaman Q., et al. (2015). Field evaluation of different chemical pesticides against aphid Toxoptera aurantii on different tea (Camellia sinensis L.) cuttings under high shade nursery. Moroccan J. Chem. 3, 127–135.

[5] Benjamini Y., Hochberg Y. (1995). Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. Royal Statal Soc. 57, 289–300. 10.1111/j.2517-6161.1995.tb02031.x - DOI

[6] Benjamini Y., Hochberg Y. (1995). Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. Royal Statal Soc. 57, 289–300. 10.1111/j.2517-6161.1995.tb02031.x - DOI

[7] Carver M. (1978). The black citrus aphids, Toxoptera citricidus (Kirkaldy) and Toxoptera aurantii (Boyer de Fonscolombe) (Homoptera: Aphididae). J. Aust. Entomol. Soc. 17, 263–270. 10.1111/j.1440-6055.1978.tb00156.x - DOI

[8] Carver M. (1978). The black citrus aphids, Toxoptera citricidus (Kirkaldy) and Toxoptera aurantii (Boyer de Fonscolombe) (Homoptera: Aphididae). J. Aust. Entomol. Soc. 17, 263–270. 10.1111/j.1440-6055.1978.tb00156.x - DOI

[9] Deng J., Liu Q., Yu Y. H., Li J. J., Huang X. L. (2019). The detection and midgut intracellular location of Rickettsia symbiont in the camellia aphid (Aphis Aurantii). Appl. Ecol. Env.l Res. 17, 12203–12212. 10.15666/aeer/1705_1220312212 - DOI

[10] Deng J., Liu Q., Yu Y. H., Li J. J., Huang X. L. (2019). The detection and midgut intracellular location of Rickettsia symbiont in the camellia aphid (Aphis Aurantii). Appl. Ecol. Env.l Res. 17, 12203–12212. 10.15666/aeer/1705_1220312212 - DOI

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Transcriptomic Profiling of Various Developmental Stages of Aphis Aurantii to Provide a Genetic Resource for Gene Expression and SSR Analysis

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Transcriptomic Profiling of Various Developmental Stages of Aphis Aurantii to Provide a Genetic Resource for Gene Expression and SSR Analysis

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