DUSP11-mediated control of 5'-triphosphate RNA regulates RIG-I sensitivity

Genes Dev. 2020 Dec 1;34(23-24):1697-1712. doi: 10.1101/gad.340604.120. Epub 2020 Nov 12.

Abstract

Deciphering the mechanisms that regulate the sensitivity of pathogen recognition receptors is imperative to understanding infection and inflammation. Here we demonstrate that the RNA triphosphatase dual-specificity phosphatase 11 (DUSP11) acts on both host and virus-derived 5'-triphosphate RNAs rendering them less active in inducing a RIG-I-mediated immune response. Reducing DUSP11 levels alters host triphosphate RNA packaged in extracellular vesicles and induces enhanced RIG-I activation in cells exposed to extracellular vesicles. Virus infection of cells lacking DUSP11 results in a higher proportion of triphosphorylated viral transcripts and attenuated virus replication, which is rescued by reducing RIG-I expression. Consistent with the activity of DUSP11 in the cellular RIG-I response, mice lacking DUSP11 display lower viral loads, greater sensitivity to triphosphorylated RNA, and a signature of enhanced interferon activity in select tissues. Our results reveal the importance of controlling 5'-triphosphate RNA levels to prevent aberrant RIG-I signaling and demonstrate DUSP11 as a key effector of this mechanism.

Keywords: DUSP11; RIG-I signaling; inflammation; innate immunity; noncoding RNA; tumor–stromal interaction; virus infection.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Line
  • DEAD Box Protein 58 / immunology*
  • Dual-Specificity Phosphatases / immunology*
  • Dual-Specificity Phosphatases / metabolism*
  • HEK293 Cells
  • Host-Pathogen Interactions
  • Humans
  • Immunity, Innate / genetics
  • Immunity, Innate / immunology
  • Interferons / metabolism
  • Liposomes / immunology
  • Mice
  • Mice, Inbred C57BL
  • Polyphosphates
  • RNA / immunology*
  • RNA Viruses / physiology
  • RNA, Viral / metabolism
  • Virus Diseases / immunology*
  • Virus Replication / genetics

Substances

  • Liposomes
  • Polyphosphates
  • RNA, Viral
  • RNA
  • Interferons
  • DUSP11 protein, human
  • Dual-Specificity Phosphatases
  • Dusp11 protein, mouse
  • DEAD Box Protein 58
  • triphosphoric acid