Removing the C-terminal protecting group enlarges the crystal size: Z-(Gly-Aib)2-OH·H2O

Acta Crystallogr C Struct Chem. 2020 Dec 1;76(Pt 12):1057-1061. doi: 10.1107/S2053229620014254. Epub 2020 Nov 9.

Abstract

The achiral tetrapeptide monohydrate N-(benzyloxycarbonyl)glycyl-α-aminoisobutyrylglycyl-α-aminoisobutyric acid monohydrate, Z-Gly-Aib-Gly-Aib-OH·H2O (Z is benzyloxycarbonyl, Aib is α-aminoisobutyric acid and Gly is glycine) or C20H28N4O7·H2O, exhibits two conformations related by the symmetry operation of an inversion centre. It adopts only one of two possible intramolecular hydrogen bonds in a type I (and I') β-turn and forms a maximum of intermolecular hydrogen bonds partly mediated by water. The space group, the molecular structure and the crystal packing differ from two already described (Gly-Aib)2 peptides which vary only in the protecting groups. This structure confirms the high structural flexibility of Gly-Aib peptides and points to a strong relationship between intermolecular hydrogen bonding and crystal quality and size.

Keywords: achiral peptide; aminoisobutyric acid; crystal size; crystal structure; glycine; hydrogen bonding; protecting group; tetrapeptide.

MeSH terms

  • Aminoisobutyric Acids / chemistry*
  • Crystallography, X-Ray
  • Glycine / analogs & derivatives*
  • Glycine / chemistry
  • Hydrogen Bonding
  • Models, Molecular
  • Molecular Structure
  • Oligopeptides / chemical synthesis
  • Oligopeptides / chemistry*
  • Protein Conformation

Substances

  • Aminoisobutyric Acids
  • Oligopeptides
  • N-benzyloxycarbonylglycine
  • 2-aminoisobutyric acid
  • Glycine