Identification of 11 novel HLA-A, -B, -C, -DRB1, and -DQB1 alleles in the 1000 Genomes Project panel

HLA. 2021 Mar;97(3):246-248. doi: 10.1111/tan.14164. Epub 2020 Dec 15.

Authors

Julie Di Cristofaro^{1

2}, Philippe Gouret³, Jacques Chiaroni^{1

2}, Laurent Abi-Rached^{4

5}, Julien Paganini³

Affiliations

¹ Etablissement Français du Sang PACA Corse, Biologie des Groupes Sanguins, Marseille, France.
² Aix Marseille Université, CNRS, EFS, ADES, "Biologie des Groupes Sanguins", Marseille, France.
³ Xegen, Gemenos, France.
⁴ Aix Marseille Université, IRD, APHM, MEPHI, IHU Méditerranée Infection, Marseille, France.
⁵ SNC5039 CNRS, Marseille, France.

PMID: 33306273
DOI: 10.1111/tan.14164

Abstract

We isolated 11 novel HLA alleles in the 1000 Genomes Project using PolyPheMe software.

Keywords: 1000 genomes project; HLA; NGS; alleles; exome.

© 2020 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

MeSH terms

Alleles
Gene Frequency
Genotype
HLA-A Antigens* / genetics
HLA-B Antigens* / genetics
HLA-C Antigens / genetics
HLA-DQ beta-Chains / genetics
HLA-DRB1 Chains / genetics
Haplotypes
Humans

Substances

HLA-A Antigens
HLA-B Antigens
HLA-C Antigens
HLA-DQ beta-Chains
HLA-DRB1 Chains