Germline Variation and Somatic Alterations in Ewing Sarcoma

Methods Mol Biol. 2021:2226:3-14. doi: 10.1007/978-1-0716-1020-6_1.

Abstract

Ewing sarcoma (EwS) is a rare bone or soft tissue tumor that occurs early in life and as such genetic variation is a major contributor to EwS risk. To date, genetic investigations have identified key somatic mutations and germline variants of importance for EwS risk. While substantial progress is being made in uncovering the genetic etiology of EwS, considerable gaps in knowledge remain. Herein, we provide a summary of methodological approaches for future genomic investigations of EwS. We anticipate this recommended analytical framework for germline and somatic investigations, along with genomic data from growing EwS case series, will aid in accelerating new genomic discoveries in EwS and expand knowledge of the genetic architecture of EwS.

Keywords: EWSR1-FLI1; Ewing sarcoma; Genetics; Germline variants; SNPs; Somatic mutations; Translocation.

Publication types

  • Review

MeSH terms

  • Animals
  • Biomarkers, Tumor*
  • Bone Neoplasms / diagnosis
  • Bone Neoplasms / genetics*
  • Genetic Association Studies
  • Genetic Predisposition to Disease*
  • Genetic Variation*
  • Genomics / methods
  • Germ-Line Mutation*
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Mutation
  • Oncogene Proteins, Fusion / genetics
  • Sarcoma, Ewing / diagnosis
  • Sarcoma, Ewing / genetics*

Substances

  • Biomarkers, Tumor
  • Oncogene Proteins, Fusion