Infection-induced 5'-half molecules of tRNAHisGUG activate Toll-like receptor 7

PLoS Biol. 2020 Dec 17;18(12):e3000982. doi: 10.1371/journal.pbio.3000982. eCollection 2020 Dec.

Abstract

Toll-like receptors (TLRs) play a crucial role in the innate immune response. Although endosomal TLR7 recognizes single-stranded RNAs, their endogenous RNA ligands have not been fully explored. Here, we report 5'-tRNA half molecules as abundant activators of TLR7. Mycobacterial infection and accompanying surface TLR activation up-regulate the expression of 5'-tRNA half molecules in human monocyte-derived macrophages (HMDMs). The abundant accumulation of 5'-tRNA halves also occur in HMDM-secreted extracellular vehicles (EVs); the abundance of EV-5'-tRNAHisGUG half molecules is >200-fold higher than that of the most abundant EV-microRNA (miRNA). Sequence identification of the 5'-tRNA halves using cP-RNA-seq revealed abundant and selective packaging of specific 5'-tRNA half species into EVs. The EV-5'-tRNAHisGUG half was experimentally demonstrated to be delivered into endosomes in recipient cells and to activate endosomal TLR7. Up-regulation of the 5'-tRNA half molecules was also observed in the plasma of patients infected with Mycobacterium tuberculosis. These results unveil a novel tRNA-engaged pathway in the innate immune response and assign the role of "immune activators" to 5'-tRNA half molecules.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Endosomes / metabolism
  • Extracellular Vesicles / genetics*
  • Extracellular Vesicles / metabolism
  • Gene Expression Regulation / genetics
  • Humans
  • Immunity, Innate / genetics
  • Immunity, Innate / physiology
  • Macrophages / metabolism
  • RNA, Transfer / metabolism
  • RNA, Transfer, His / genetics
  • RNA, Transfer, His / metabolism*
  • RNA, Transfer, His / physiology
  • THP-1 Cells
  • Toll-Like Receptor 7 / metabolism*
  • Toll-Like Receptor 7 / physiology

Substances

  • RNA, Transfer, His
  • TLR7 protein, human
  • Toll-Like Receptor 7
  • RNA, Transfer