ER/K-link-Leveraging a native protein linker to probe dynamic cellular interactions

Methods Enzymol. 2021:647:173-208. doi: 10.1016/bs.mie.2020.10.002. Epub 2020 Nov 18.

Abstract

ER/K α-helices are a subset of single alpha helical domains, which exhibit unusual stability as isolated protein secondary structures. They adopt an elongated structural conformation, while regulating the frequency of interactions between proteins or polypeptides fused to their ends. Here we review recent advances on the structure, stability and function of ER/K α-helices as linkers (ER/K linkers) in native proteins. We describe methodological considerations in the molecular cloning, protein expression and measurement of interaction strengths, using sensors incorporating ER/K linkers. We highlight biological insights obtained over the last decade by leveraging distinct biophysical features of ER/K-linked sensors. We conclude with the outlook for the use of ER/K linkers in the selective modulation of dynamic cellular interactions.

Keywords: ER/K linker; FRET biosensors; GPCR; Kinases; Protein-protein interactions; Signaling; Single alpha helix.

Publication types

  • Research Support, N.I.H., Extramural
  • Review

MeSH terms

  • Models, Molecular
  • Peptides* / genetics
  • Protein Conformation, alpha-Helical
  • Protein Structure, Secondary
  • Proteins* / genetics

Substances

  • Peptides
  • Proteins