Known Drugs Identified by Structure-Based Virtual Screening Are Able to Bind Sigma-1 Receptor and Increase Growth of Huntington Disease Patient-Derived Cells

Int J Mol Sci. 2021 Jan 28;22(3):1293. doi: 10.3390/ijms22031293.

Abstract

Huntington disease (HD) is a devastating and presently untreatable neurodegenerative disease characterized by progressively disabling motor and mental manifestations. The sigma-1 receptor (σ1R) is a protein expressed in the central nervous system, whose 3D structure has been recently determined by X-ray crystallography and whose agonists have been shown to have neuroprotective activity in neurodegenerative diseases. To identify therapeutic agents against HD, we have implemented a drug repositioning strategy consisting of: (i) Prediction of the ability of the FDA-approved drugs publicly available through the ZINC database to interact with σ1R by virtual screening, followed by computational docking and visual examination of the 20 highest scoring drugs; and (ii) Assessment of the ability of the six drugs selected by computational analyses to directly bind purified σ1R in vitro by Surface Plasmon Resonance and improve the growth of fibroblasts obtained from HD patients, which is significantly impaired with respect to control cells. All six of the selected drugs proved able to directly bind purified σ1R in vitro and improve the growth of HD cells from both or one HD patient. These results support the validity of the drug repositioning procedure implemented herein for the identification of new therapeutic tools against HD.

Keywords: Huntington disease (HD); cellular models; computational docking; drug repositioning; sigma-1 receptor (σ1R); structure analysis; surface plasmon resonance (SPR); virtual screening.

MeSH terms

  • Adult
  • Cell Proliferation
  • Cells, Cultured
  • Computer Simulation
  • Databases, Pharmaceutical
  • Drug Evaluation, Preclinical
  • Drug Repositioning
  • Fibroblasts / cytology*
  • Fibroblasts / drug effects
  • Fibroblasts / metabolism
  • Humans
  • Huntington Disease / drug therapy
  • Huntington Disease / metabolism*
  • Male
  • Middle Aged
  • Models, Molecular
  • Molecular Docking Simulation
  • Pharmaceutical Preparations / chemistry*
  • Protein Conformation
  • Receptors, sigma / chemistry
  • Receptors, sigma / metabolism*
  • Sigma-1 Receptor
  • Structure-Activity Relationship
  • Surface Plasmon Resonance

Substances

  • Pharmaceutical Preparations
  • Receptors, sigma