Pseudo Natural Products-Chemical Evolution of Natural Product Structure

Angew Chem Int Ed Engl. 2021 Jul 12;60(29):15705-15723. doi: 10.1002/anie.202016575. Epub 2021 Mar 23.

Abstract

Pseudo-natural products (PNPs) combine natural product (NP) fragments in novel arrangements not accessible by current biosynthesis pathways. As such they can be regarded as non-biogenic fusions of NP-derived fragments. They inherit key biological characteristics of the guiding natural product, such as chemical and physiological properties, yet define small molecule chemotypes with unprecedented or unexpected bioactivity. We iterate the design principles underpinning PNP scaffolds and highlight their syntheses and biological investigations. We provide a cheminformatic analysis of PNP collections assessing their molecular properties and shape diversity. We propose and discuss how the iterative analysis of NP structure, design, synthesis, and biological evaluation of PNPs can be regarded as a human-driven branch of the evolution of natural products, that is, a chemical evolution of natural product structure.

Keywords: biological activity; chemical biology; fragment-based design; natural products; natural selection.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Biological Products / chemistry*
  • Evolution, Chemical*
  • Humans
  • Small Molecule Libraries / chemistry

Substances

  • Biological Products
  • Small Molecule Libraries