Structural Determinants for the Mode of Action of Imidazopyridine DS2 at δ-Containing γ-Aminobutyric Acid Type A Receptors

J Med Chem. 2021 Apr 22;64(8):4730-4743. doi: 10.1021/acs.jmedchem.0c02163. Epub 2021 Apr 13.

Abstract

Despite the therapeutic relevance of δ-containing γ-aminobutyric acid type A receptors (GABAARs) and the need for δ-selective compounds, the structural determinants for the mode and molecular site of action of δ-selective positive allosteric modulator imidazo[1,2-a]pyridine DS2 remain elusive. To guide the quest for insight, we synthesized a series of DS2 analogues guided by a structural receptor model. Using a fluorescence-based fluorometric imaging plate reader membrane potential assay, we found that the δ-selectivity and the pharmacological profile are severely affected by substituents in the 5-position of the imidazopyridine core scaffold. Interestingly, the 5-methyl, 5-bromo, and 5-chloro DS2 analogues, 30, 35, and 36, were shown to be superior to DS2 at α4β1δ as mid-high nanomolar potency δ-selective allosteric modulators, displaying 6-16 times higher potency than DS2. Of these, 30 also displayed at least 60-fold selectivity for α4β1δ over α4β1γ2 receptor subtypes representing a potential tool for the selective characterization of δ-containing GABAARs in general.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Allosteric Regulation
  • Binding Sites
  • Drug Design
  • HEK293 Cells
  • Humans
  • Ligands
  • Molecular Docking Simulation
  • Protein Subunits / chemistry
  • Protein Subunits / metabolism
  • Pyridines / chemistry*
  • Pyridines / metabolism
  • Receptors, GABA-A / chemistry
  • Receptors, GABA-A / metabolism*
  • Structure-Activity Relationship

Substances

  • Ligands
  • Protein Subunits
  • Pyridines
  • Receptors, GABA-A
  • imidazo(1,2-a)pyridine