Cryo-kinetics Reveal Dynamic Effects on the Chemistry of Human Dihydrofolate Reductase

Chembiochem. 2021 Jul 15;22(14):2410-2414. doi: 10.1002/cbic.202100017. Epub 2021 May 4.

Abstract

Effects of isotopic substitution on the rate constants of human dihydrofolate reductase (HsDHFR), an important target for anti-cancer drugs, have not previously been characterized due to its complex fast kinetics. Here, we report the results of cryo-measurements of the kinetics of the HsDHFR catalyzed reaction and the effects of protein motion on catalysis. Isotopic enzyme labeling revealed an enzyme KIE (kHLE /kHHE ) close to unity above 0 °C; however, the enzyme KIE was increased to 1.72±0.15 at -20 °C, indicating that the coupling of protein motions to the chemical step is minimized under optimal conditions but enhanced at non-physiological temperatures. The presented cryogenic approach provides an opportunity to probe the kinetics of mammalian DHFRs, thereby laying the foundation for characterizing their transition state structure.

Keywords: DHFRs and protein motions; cryo-kinetics; heavy enzyme; human dihydrofolate reductase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Tetrahydrofolate Dehydrogenase*

Substances

  • Tetrahydrofolate Dehydrogenase