Computer aided drug discovery review for infectious diseases with case study of anti-Chagas project

Parasitol Int. 2021 Aug:83:102366. doi: 10.1016/j.parint.2021.102366. Epub 2021 Apr 27.

Abstract

Neglected tropical diseases (NTDs) are parasitic and bacterial infections that are widespread, especially in the tropics, and cause health problems for about one billion people over 149 countries worldwide. However, in terms of therapeutic agents, for example, nifurtimox and benznidazole were developed in the 1960s to treat Chagas disease, but new drugs are desirable because of their side effects. Drug discovery takes 12 to 14 years and costs $2.6 billon dollars, and hence, computer aided drug discovery (CADD) technology is expected to reduce the time and cost. This paper describes our methods and results based on CADD, mainly for NTDs. An overview of databases, molecular simulation and pharmacophore modeling, contest-based drug discovery, and machine learning and their results are presented herein.

Keywords: Computer aided drug discovery; Fragment molecular orbital method; Machine learning; Molecular dynamics method; Neglected tropical diseases.

MeSH terms

  • Chagas Disease / prevention & control*
  • Computer-Aided Design / statistics & numerical data
  • Drug Discovery / methods*
  • Trypanocidal Agents / chemistry*
  • Trypanocidal Agents / pharmacology

Substances

  • Trypanocidal Agents