Pancancer Analysis of Neurovascular-Related NRP Family Genes as Potential Prognostic Biomarkers of Bladder Urothelial Carcinoma

Biomed Res Int. 2021 Apr 15:2021:5546612. doi: 10.1155/2021/5546612. eCollection 2021.

Abstract

Background: Neurovascular-related genes have been implicated in the development of cancer. Studies have shown that a high expression of neuropilins (NRPs) promotes tumourigenesis and tumour malignancy.

Method: A multidimensional bioinformatics analysis was performed to examine the relationship between NRP genes and prognostic and pathological features, tumour mutational burden (TMB), microsatellite instability (MSI), and immunological features based on public databases and find the potential prognostic value of NRPs in pancancer.

Results: Survival analysis revealed that a low NRP1 expression in adrenocortical carcinoma (ACC), cervical squamous cell carcinoma and endocervical adenocarcinoma (CESC), low-grade glioma (LGG), and stomach adenocarcinoma (STAD) was associated with poor prognosis. A high NRP2 expression in bladder urothelial carcinoma (BLCA), kidney renal papillary cell carcinoma (KIRP), and mesothelioma (MESO) was associated with poor prognosis. Moreover, NRP1 and NRP2 were associated with TMB and MSI. Subsequent analyses showed that NRP1 and NRP2 were correlated with immune infiltration and immune checkpoints. Genome-wide association analysis revealed that the NRP1 expression was strongly associated with kidney renal clear cell carcinoma (KIRC), whereas the NRP2 expression was closely associated with BLCA. Ultimately, NRP2 was found to be involved in the development of BLCA.

Conclusions: Neurovascular-related NRP family genes are significantly correlated with cancer prognosis, TME, and immune infiltration, particularly in BLCA.

Publication types

  • Retracted Publication

MeSH terms

  • Biomarkers, Tumor* / genetics
  • Biomarkers, Tumor* / immunology
  • Biomarkers, Tumor* / metabolism
  • Female
  • Genome-Wide Association Study
  • Humans
  • Male
  • Neoplasms / diagnostic imaging
  • Neoplasms / genetics
  • Neoplasms / immunology
  • Neoplasms / mortality
  • Neuropilins* / genetics
  • Neuropilins* / immunology
  • Neuropilins* / metabolism
  • Prognosis
  • Transcriptome / genetics
  • Transcriptome / immunology
  • Tumor Microenvironment / genetics
  • Urinary Bladder Neoplasms* / diagnosis
  • Urinary Bladder Neoplasms* / genetics
  • Urinary Bladder Neoplasms* / immunology
  • Urinary Bladder Neoplasms* / mortality

Substances

  • Biomarkers, Tumor
  • Neuropilins