Study on Mechanism of Ginkgo biloba L. Leaves for the Treatment of Neurodegenerative Diseases Based on Network Pharmacology

Neurochem Res. 2021 Jul;46(7):1881-1894. doi: 10.1007/s11064-021-03315-z. Epub 2021 May 14.

Abstract

Ginkgo biloba L. leaves (GBLs), as widely used plant extract sources, significantly improve cognitive, learning and memory function in patients with dementia. However, few studies have been conducted on the specific mechanism of Neurodegenerative diseases (NDs). In this study, network pharmacology was employed to elucidate potential mechanism of GBLs in the treatment of NDs. Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP) was used to obtain the chemical components in accordance with the screening principles of oral availability and drug-like property. Potential targets of GBLs were integrated with disease targets, and intersection targets were exactly the potential action targets of GBLs for treating NDs; these key targets were enriched and analyzed by the protein protein interaction (PPI) analysis and molecular docking verification. Key genes were ultimately used to find the biological pathway and explain the therapeutic mechanism by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. Twenty-seven active components of GBLs may affect biological processes such as oxidative reactions and activate transcription factor activities. These components may also affect 120 metabolic pathways, such as the PI3K/AKT pathway, by regulating 147 targets, including AKT1, ALB, HSP90AA1, PTGS2, MMP9, EGFR and APP. By using the software iGEMDOCK, the main target proteins were found to bind well to the main active components of GBLs. GBLs have the characteristics of multi-component and multi-target synergistic effect on the treatment of NDs, which preliminarily predicted its possible molecular mechanism of action, and provided the basis for the follow-up study.

Keywords: Ginkgo biloba L.; Leaves; Molecular docking; Network pharmacology; Neurodegenerative diseases; PI3K/AKT pathway.

MeSH terms

  • Databases, Pharmaceutical
  • Drugs, Chinese Herbal / chemistry*
  • Drugs, Chinese Herbal / metabolism
  • Gene Ontology
  • Ginkgo biloba / chemistry*
  • Humans
  • Molecular Docking Simulation
  • Neurodegenerative Diseases / drug therapy*
  • Nootropic Agents / chemistry*
  • Nootropic Agents / metabolism
  • Pharmacology / methods
  • Plant Leaves / chemistry*
  • Protein Binding
  • Protein Interaction Maps
  • Proteins / metabolism

Substances

  • Drugs, Chinese Herbal
  • Nootropic Agents
  • Proteins