RNA helicase DDX5 enables STAT1 mRNA translation and interferon signalling in hepatitis B virus replicating hepatocytes

Gut. 2022 May;71(5):991-1005. doi: 10.1136/gutjnl-2020-323126. Epub 2021 May 21.

Abstract

Objective: RNA helicase DDX5 is downregulated during HBV replication and poor prognosis HBV-related hepatocellular carcinoma (HCC). The objective of this study is to investigate the role of DDX5 in interferon (IFN) signalling. We provide evidence of a novel mechanism involving DDX5 that enables translation of transcription factor STAT1 mediating the IFN response.

Design and results: Molecular, pharmacological and biophysical assays were used together with cellular models of HBV replication, HCC cell lines and liver tumours. We demonstrate that DDX5 regulates STAT1 mRNA translation by resolving a G-quadruplex (rG4) RNA structure, proximal to the 5' end of STAT1 5'UTR. We employed luciferase reporter assays comparing wild type (WT) versus mutant rG4 sequence, rG4-stabilising compounds, CRISPR/Cas9 editing of the STAT1-rG4 sequence and circular dichroism determination of the rG4 structure. STAT1-rG4 edited cell lines were resistant to the effect of rG4-stabilising compounds in response to IFN-α, while HCC cell lines expressing low DDX5 exhibited reduced IFN response. Ribonucleoprotein and electrophoretic mobility assays demonstrated direct and selective binding of RNA helicase-active DDX5 to the WT STAT1-rG4 sequence. Immunohistochemistry of normal liver and liver tumours demonstrated that absence of DDX5 corresponded to absence of STAT1. Significantly, knockdown of DDX5 in HBV infected HepaRG cells reduced the anti-viral effect of IFN-α.

Conclusion: RNA helicase DDX5 resolves a G-quadruplex structure in 5'UTR of STAT1 mRNA, enabling STAT1 translation. We propose that DDX5 is a key regulator of the dynamic range of IFN response during innate immunity and adjuvant IFN-α therapy.

Keywords: hepatitis B; hepatocellular carcinoma; hepatocyte; interferon-alpha; molecular mechanisms.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • 5' Untranslated Regions / genetics
  • Antiviral Agents / pharmacology
  • Carcinoma, Hepatocellular* / metabolism
  • DEAD-box RNA Helicases / genetics
  • DEAD-box RNA Helicases / metabolism
  • DEAD-box RNA Helicases / pharmacology
  • Hepatitis B virus
  • Hepatocytes / metabolism
  • Humans
  • Interferon-alpha / metabolism
  • Interferon-alpha / pharmacology
  • Liver Neoplasms* / metabolism
  • Protein Biosynthesis
  • RNA Helicases / genetics
  • RNA Helicases / metabolism
  • RNA Helicases / pharmacology
  • STAT1 Transcription Factor / genetics
  • STAT1 Transcription Factor / metabolism
  • Virus Replication

Substances

  • 5' Untranslated Regions
  • Antiviral Agents
  • Interferon-alpha
  • STAT1 Transcription Factor
  • STAT1 protein, human
  • Ddx5 protein, human
  • DEAD-box RNA Helicases
  • RNA Helicases