On the time-varying predictive performance of longitudinal biomarkers: Measure and estimation

Stat Med. 2021 Oct 15;40(23):5065-5077. doi: 10.1002/sim.9111. Epub 2021 Jun 22.

Abstract

In many biomedical studies, participants are monitored at periodic visits until the occurrence of the failure event. Biomarkers are often measured repeatedly during these visits, and such measurements can facilitate updated disease prediction. In this work, we propose a two-dimensional incident dynamic area under curve (AUC), to capture the variability due to both the biomarker assessment time and the prediction time to comprehensively quantify the predictive performance of a longitudinal biomarker. We propose a pseudo partial-likelihood to achieve consistent estimation of the AUC under two realistic scenarios of visit schedules. Variance estimation methods are designed to facilitate inferential procedures. We examine the finite-sample performance of our method through extensive simulations. The methods are applied to a study of chronic myeloid leukemia to evaluate the predictive performance of longitudinally collected gene expression levels.

Keywords: area under curve; longitudinal biomarker; predictive discrimination; pseudo partial-likelihoods; survival outcome.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Area Under Curve*
  • Biomarkers
  • Humans
  • Probability

Substances

  • Biomarkers