The advanced treatment of hydrogen bonding in quantum crystallography

J Appl Crystallogr. 2021 Apr 16;54(Pt 3):718-729. doi: 10.1107/S1600576721001126. eCollection 2021 Jun 1.

Abstract

Although hydrogen bonding is one of the most important motifs in chemistry and biology, H-atom parameters are especially problematic to refine against X-ray diffraction data. New developments in quantum crystallography offer a remedy. This article reports how hydrogen bonds are treated in three different quantum-crystallographic methods: Hirshfeld atom refinement (HAR), HAR coupled to extremely localized molecular orbitals and X-ray wavefunction refinement. Three different compound classes that form strong intra- or intermolecular hydrogen bonds are used as test cases: hydrogen maleates, the tripeptide l-alanyl-glycyl-l-alanine co-crystallized with water, and xylitol. The differences in the quantum-mechanical electron densities underlying all the used methods are analysed, as well as how these differences impact on the refinement results.

Keywords: Hirshfeld atom refinement; X-ray constrained wavefunction fitting; electron density; hydrogen bonding; quantum crystallography.

Grants and funding

This work was funded by Deutsche Forschungsgemeinschaft grants GR 4451/1-1 and GR 4451/2-1. Australian Research Council grants DP110105347 and DE140101330. Agence Nationale de la Recherche grant ANR-17-CE29-0005-01 to Alessandro Genoni.