Expression of ovine CTNNA3 and CAP2 genes and their association with growth traits

Gene. 2022 Jan 10:807:145949. doi: 10.1016/j.gene.2021.145949. Epub 2021 Sep 2.

Abstract

Growth traits is a critical economic trait for animal husbandry. In this study, the SNPs of CTNNA3 and CAP2 genes were investigated to check whether they are associated with growth traits (body weight, body height, body length and chest circumference) in Hu sheep. The result of the association analysis indicated that the mutation in CTNNA3 (g.2018018 A > G) were associated significantly with body weight, body height, body length and chest circumference (P < 0.05), the mutation in CAP2 (g.8588 T > C) were associated significantly with body height at 140, 160, 180 days (P < 0.05), AA and CC of CTNNA3 and CAP2 were the dominant genotypes associated with growth traits in Hu sheep. Moreover, combined effect analyses indicated that the growth traits with combined genotypes AACTNNA3-CCCAP2 and AACTNNA3-CTCAP2 were higher than those with genotype GGCTNNA3-CTCAP2. RT-qPCR indicated that CTNNA3 expression levels were significantly higher in liver and lung than in other nine tissues (P < 0.05), CAP2 expression levels were significantly higher in bone, heart, liver, lung and duodenum than in other six tissues (P < 0.05). In conclusion, CTNNA3 and CAP2 polymorphisms could be used as genetic markers for improving growth traits in Hu sheep husbandry.

Keywords: Expression profile; Genetic; Genetic association studies; Growth traits; Hu sheep; Polymorphism.

MeSH terms

  • Adaptor Proteins, Signal Transducing / genetics*
  • Animals
  • Body Weight / genetics*
  • China
  • Genetic Markers / genetics
  • Genotype
  • Haplotypes / genetics
  • Humans
  • Linkage Disequilibrium
  • Male
  • Membrane Proteins / genetics
  • Membrane Proteins / metabolism
  • Phenotype
  • Polymorphism, Single Nucleotide / genetics
  • Sheep / genetics
  • Sheep / growth & development*
  • alpha Catenin / genetics
  • alpha Catenin / metabolism

Substances

  • Adaptor Proteins, Signal Transducing
  • Genetic Markers
  • Membrane Proteins
  • alpha Catenin