Genome-wide analysis of poplar HD-Zip family and over-expression of PsnHDZ63 confers salt tolerance in transgenic Populus simonii × P.nigra

Plant Sci. 2021 Oct:311:111021. doi: 10.1016/j.plantsci.2021.111021. Epub 2021 Aug 14.

Abstract

HD-Zip is a plant-specific HB transcription factor, which participates in plant development and stress response. In this study, we identified 63 poplar HD-Zip transcription factors, which were randomly distributed on 19 chromosomes of poplar. Based on the gene structure and phylogenetic relationship, these members are divided into four groups, which have a variety of collinear evolutionary relationships. They also have rich segmental replication events and experienced strong purification selection. Based on RNA-seq analysis, we profiled the expression pattern of the 63 HD-Zip members under salt stress. Subsequently, we carried out in-depth study on the significantly up-regulated PsnHDZ63 in the stems and leaves. The transgenic Populus simonii × P.nigra plants over-expressing PsnHDZ63 displayed better morphological and physiological indexes than WT under salt stress. In addition, PsnHDZ63 enhanced salt stress tolerance of transgenic lines by combining effective stress-resistant elements to improve reactive oxygen species scavenging ability. These studies laid a foundation for a comprehensive understanding of poplar HD-Zip family members, and revealed the important role of PsnHDZ63 in plant salt tolerance.

Keywords: Gene expression; Growth and physiological traits; HD-Zip family; Poplar; Salt tolerance.

Publication types

  • Comparative Study

MeSH terms

  • Arabidopsis / genetics*
  • Gene Expression Regulation, Plant
  • Genes, Plant
  • Genetic Variation
  • Genome-Wide Association Study
  • Genotype
  • Plants, Genetically Modified / physiology*
  • Populus / genetics*
  • Populus / growth & development*
  • Salt Tolerance / genetics*
  • Sequence Analysis, Protein
  • Stress, Physiological / genetics*
  • Transcription Factors / genetics*

Substances

  • Transcription Factors