A prion accelerates proliferation at the expense of lifespan

Elife. 2021 Sep 15:10:e60917. doi: 10.7554/eLife.60917.

Abstract

In fluctuating environments, switching between different growth strategies, such as those affecting cell size and proliferation, can be advantageous to an organism. Trade-offs arise, however. Mechanisms that aberrantly increase cell size or proliferation-such as mutations or chemicals that interfere with growth regulatory pathways-can also shorten lifespan. Here we report a natural example of how the interplay between growth and lifespan can be epigenetically controlled. We find that a highly conserved RNA-modifying enzyme, the pseudouridine synthase Pus4/TruB, can act as a prion, endowing yeast with greater proliferation rates at the cost of a shortened lifespan. Cells harboring the prion grow larger and exhibit altered protein synthesis. This epigenetic state, [BIG+] (better in growth), allows cells to heritably yet reversibly alter their translational program, leading to the differential synthesis of dozens of proteins, including many that regulate proliferation and aging. Our data reveal a new role for prion-based control of an RNA-modifying enzyme in driving heritable epigenetic states that transform cell growth and survival.

Keywords: RNA modification; S. cerevisiae; aging; cell size; chromosomes; epigenetics; gene expression; genetics; genomics; prions; protein synthesis.

Plain language summary

Cells make different proteins to perform different tasks. Each protein is a long chain of building blocks called amino acids that must fold into a particular shape before it can be useful. Some proteins can fold in more than one way, a normal form and a ‘prion’ form. Prions are unusual in that they can force normally folded proteins with the same amino acid sequence as them to refold into new prions. This means that a single prion can make many more that are inherited when cells divide. Some prions can cause disease, but others may be beneficial. Pus4 is a yeast protein that is typically involved in modifying ribonucleic acids, molecules that help translate genetic information into new proteins. Sometimes Pus4 can adopt a beneficial prion conformation called [BIG+]. When yeast cells have access to plenty of nutrients, [BIG+] helps them grow faster and larger, but this comes at the cost of a shorter lifespan. Garcia, Campbell et al. combined computational modeling and experiments in baker’s yeast (Saccharomyces cerevisiae) to investigate the role of [BIG+]. They found that the prion accelerated protein production, leading to both faster growth and a shorter lifespan in these cells, even without any changes in gene sequence. Garcia, Campbell et al.’s findings explain the beneficial activity of prion proteins in baker’s yeast cells. The results also describe how cells balance a tradeoff between growth and lifespan without any changes in the genome. This helps to highlight that genetics do not always explain the behaviors of cells, and further methods are needed to better understand cell biology.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Cell Enlargement
  • Cell Proliferation*
  • Epigenesis, Genetic
  • Gene Expression Regulation, Enzymologic
  • Gene Expression Regulation, Fungal
  • HSP70 Heat-Shock Proteins / genetics
  • HSP70 Heat-Shock Proteins / metabolism
  • Intramolecular Transferases / genetics
  • Intramolecular Transferases / metabolism*
  • Longevity
  • Meiosis*
  • Prion Proteins / genetics
  • Prion Proteins / metabolism*
  • Protein Biosynthesis
  • Saccharomyces cerevisiae / enzymology*
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / growth & development
  • Saccharomyces cerevisiae Proteins / genetics
  • Saccharomyces cerevisiae Proteins / metabolism*
  • Time Factors

Substances

  • HSP70 Heat-Shock Proteins
  • Prion Proteins
  • Saccharomyces cerevisiae Proteins
  • Intramolecular Transferases
  • tRNA-pseudouridine synthase I

Associated data

  • GEO/GSE176577