Identifying Putative Causal Links between MicroRNAs and Severe COVID-19 Using Mendelian Randomization

Cells. 2021 Dec 11;10(12):3504. doi: 10.3390/cells10123504.

Abstract

The SARS-CoV-2 (COVID-19) pandemic has caused millions of deaths worldwide. Early risk assessment of COVID-19 cases can help direct early treatment measures that have been shown to improve the prognosis of severe cases. Currently, circulating miRNAs have not been evaluated as canonical COVID-19 biomarkers, and identifying biomarkers that have a causal relationship with COVID-19 is imperative. To bridge these gaps, we aim to examine the causal effects of miRNAs on COVID-19 severity in this study using two-sample Mendelian randomization approaches. Multiple studies with available GWAS summary statistics data were retrieved. Using circulating miRNA expression data as exposure, and severe COVID-19 cases as outcomes, we identified ten unique miRNAs that showed causality across three phenotype groups of COVID-19. Using expression data from an independent study, we validated and identified two high-confidence miRNAs, namely, hsa-miR-30a-3p and hsa-miR-139-5p, which have putative causal effects on developing cases of severe COVID-19. Using existing literature and publicly available databases, the potential causative roles of these miRNAs were investigated. This study provides a novel way of utilizing miRNA eQTL data to help us identify potential miRNA biomarkers to make better and early diagnoses and risk assessments of severe COVID-19 cases.

Keywords: COVID-19; Mendelian randomization; SARS-CoV-2; biomarker; microRNA.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Biomarkers / blood
  • COVID-19 / blood
  • COVID-19 / genetics*
  • Circulating MicroRNA / blood
  • Circulating MicroRNA / genetics*
  • Genome-Wide Association Study
  • Humans
  • Mendelian Randomization Analysis
  • MicroRNAs / blood
  • MicroRNAs / genetics*
  • Patient Acuity*
  • SARS-CoV-2 / genetics*
  • SARS-CoV-2 / metabolism

Substances

  • Biomarkers
  • Circulating MicroRNA
  • MIRN139 microRNA, human
  • MIRN30a microRNA, human
  • MicroRNAs