1H, 13C and 15N resonance assignments of the first BIR domain of cellular inhibitor of apoptosis protein 1

Biomol NMR Assign. 2022 Apr;16(1):91-95. doi: 10.1007/s12104-022-10065-8. Epub 2022 Jan 21.

Abstract

Cellular inhibitor of apoptosis protein-1 (cIAP-1) is member of inhibitor of apoptosis proteins (IAPs) which can affect apoptosis through interactions with caspases. cIAP-1 is a multi-domain protein and able to regulate apoptosis through interactions with proteins such as caspases and possesses E3 ligase activity. Human cIAP-1 contains three baculovirus IAP repeat (BIR) domains which are critical for protein-protein interactions. Here, we report NMR resonance assignments of the first BIR domain of human cIAP. Its secondary structures in solution were determined based on the assigned resonances. The dynamics of this domain was obtained, and our hydrogen-deuterium exchange experiment reveals that the first helix in BIR1 is exposed to the solvent. The availability of assignments of backbone and side chain resonances will be useful for probing protein-protein interactions.

Keywords: Apoptosis; Backbone assignment; Baculovirus IAP repeat; NMR; Protein dynamics; cIAP.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Apoptosis / physiology
  • Baculoviral IAP Repeat-Containing 3 Protein / metabolism
  • Baculoviridae* / metabolism
  • Caspases / metabolism
  • Cell Line
  • Humans
  • Inhibitor of Apoptosis Proteins* / chemistry
  • Inhibitor of Apoptosis Proteins* / metabolism
  • Nuclear Magnetic Resonance, Biomolecular
  • Protein Binding

Substances

  • Inhibitor of Apoptosis Proteins
  • Baculoviral IAP Repeat-Containing 3 Protein
  • Caspases