Genomic data resource of type strains of genus Pseudoxanthomonas

Kanika Bansal; Sanjeet Kumar; Prashant P Patil; Shikha Sharma; Prabhu B Patil

doi:10.1016/j.dib.2022.108145

Genomic data resource of type strains of genus Pseudoxanthomonas

Data Brief. 2022 Apr 15:42:108145. doi: 10.1016/j.dib.2022.108145. eCollection 2022 Jun.

Authors

Kanika Bansal¹, Sanjeet Kumar¹, Prashant P Patil¹, Shikha Sharma¹, Prabhu B Patil¹

Affiliation

¹ Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector-39A, Chandigarh 160036, India.

Abstract

Genus Pseudoxanthomonas represents a relatively newly characterized group of gamma-proteobacterium of environmental origin. Species of the genus have very similar morphology to strains belonging to Xanthomonas, Xylella and Stenotrophomonas. However, the genome resource of this genus was largely unexplored. The species belonging to the genus are from a wide range of environmental sites including hydrocarbon polluted fields. Here, we have provided the whole genome sequence of all available type strains of the genus of Pseudoxanthomonas. In order to deduce the differences with closely related genera, we have employed the whole genome-based investigation of the type species of genus Pseudoxanthomonas.

Keywords: Illumina MiSeq; OrthoANI; Phylogenomics; Pseudoxanthomonas; Type strains; Whole genome sequencing.