USP13 genetics and expression in a family with thyroid cancer

Endocrine. 2022 Aug;77(2):281-290. doi: 10.1007/s12020-022-03068-x. Epub 2022 May 18.

Abstract

Purpose: Papillary thyroid carcinoma (PTC) is the most common type of thyroid carcinoma and its incidence has greatly increased in the last 30 years. Ubiquitin-specific protease 13 (USP13) is a class of deubiquitinating enzymes (DUBs) and plays an important role in cellular functions such as cell cycle regulation, DNA damage repair, and different cell signaling pathways. Studies regarding the role of USP13 in cancer development and progression are divergent and there are no previous data regarding the role of USP13 gene in PTCs. In this study, we investigated the genetic cause of PTC diagnosed in multiple members of a Brazilian family.

Methods: Whole exome sequencing (WES) was performed to identify the genetic cause of PTC. Cycloheximide chase assay and clonogenic assay were performed to study USP13 stability and function in vitro.

Results: WES analysis identified a heterozygous missense variant c.1483G > A (p.V495M) in the USP13 gene that fully segregates with the disease. In silico modeling suggests that this variant may cause protein structural perturbations. USP13 overexpression increased the potential of a single cell to form colonies. The USP13 c.1483G > A variant enhanced the effects seen in USP13 overexpression and preserved protein stability for longer hours compared to the non-mutated USP13 protein.

Conclusion: Our study suggests that USP13 overexpression may play a role in tumorigenesis of PTCs; and that the USP13 p.V495M (c.1483G > A) variant enhances USP13 estability.

Keywords: Oncogene; Papillary thyroid carcinoma; Pathogenic variant; Ubiquitin-specific protease 13.

Publication types

  • Case Reports

MeSH terms

  • Endopeptidases* / genetics
  • Humans
  • Signal Transduction
  • Thyroid Cancer, Papillary / genetics
  • Thyroid Neoplasms* / genetics
  • Ubiquitin-Specific Proteases / genetics
  • Ubiquitin-Specific Proteases / metabolism

Substances

  • Endopeptidases
  • USP13 protein, human
  • Ubiquitin-Specific Proteases