XAB2 dynamics during DNA damage-dependent transcription inhibition

Elife. 2022 Jul 26:11:e77094. doi: 10.7554/eLife.77094.

Abstract

Xeroderma Pigmentosum group A-binding protein 2 (XAB2) is a multifunctional protein playing a critical role in distinct cellular processes including transcription, splicing, DNA repair, and messenger RNA export. In this study, we demonstrate that XAB2 is involved specifically and exclusively in Transcription-Coupled Nucleotide Excision Repair (TC-NER) reactions and solely for RNA polymerase 2 (RNAP2)-transcribed genes. Surprisingly, contrary to all the other NER proteins studied so far, XAB2 does not accumulate on the local UV-C damage; on the contrary, it becomes more mobile after damage induction. XAB2 mobility is restored when DNA repair reactions are completed. By scrutinizing from which cellular complex/partner/structure XAB2 is released, we have identified that XAB2 is detached after DNA damage induction from DNA:RNA hybrids, commonly known as R-loops, and from the CSA and XPG proteins. This release contributes to the DNA damage recognition step during TC-NER, as in the absence of XAB2, RNAP2 is blocked longer on UV lesions. Moreover, we also demonstrate that XAB2 has a role in retaining RNAP2 on its substrate without any DNA damage.

Keywords: CSA; R-loops; RNA polymerase 2; TC-NER; XAB2; cell biology; human; pre-mRNA splicing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA Damage
  • DNA Repair
  • RNA Polymerase II / metabolism
  • Transcription Factors* / metabolism
  • Transcription, Genetic*

Substances

  • Transcription Factors
  • RNA Polymerase II

Grants and funding

The funders had no role in study design, data collection, and interpretation, or the decision to submit the work for publication.