In silico and in vitro analysis of a rational mutation in gIII signal peptide and its effects on periplasmic expression of rhGH in E. coli

Arch Microbiol. 2022 Aug 24;204(9):572. doi: 10.1007/s00203-022-03193-1.

Abstract

The secretion efficiency of a heterologous protein in E. coli is mainly dictated by the N-terminal signal peptide fused to the desired protein. In this study, we aimed to select and introduce mutations into the - 1, - 2 and - 3 positions of the gIII signal peptide (originated from filamentous phage fd Gene III) fused to the N-terminus of the human growth hormone (hGH), and study its effect on the secretion efficiency of the recombinant hGH into the periplasmic space of E. coli Top10. Bioinformatics software such as SignalP-5.0 and PrediSi were employed to predict the effects of the mutations on the secretion efficiency of the recombinant hGH. Site-directed mutagenesis was applied to introduce the desired mutations into the C-terminus of the gIII signal peptide. The periplasmic expression and the secretion efficiency of the recombinant hGH using the native and mutant gIII signal peptides were compared in E. coli Top10 under the control of araBAD promoter. Our results from bioinformatics analysis indicated that the mutant gIII signal peptide was more potent than the native one for secretion of the recombinant hGH in E. coli. While our experimental results revealed that the mutation had no effect on hGH secretion. This result points to the importance of experimental validation of bioinformatics predictions.

Keywords: Bioinformatics; E. coli; Mutagenesis; Signal peptide; gIII; rhGH.

MeSH terms

  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Human Growth Hormone* / genetics
  • Human Growth Hormone* / metabolism
  • Humans
  • Mutation
  • Periplasm* / metabolism
  • Protein Sorting Signals / genetics
  • Recombinant Proteins / genetics

Substances

  • Protein Sorting Signals
  • Recombinant Proteins
  • Human Growth Hormone