Two Radical SAM Enzymes Are Necessary and Sufficient for the In Vitro Production of the Oxetane Nucleoside Antiviral Agent Albucidin

Angew Chem Int Ed Engl. 2022 Oct 17;61(42):e202210362. doi: 10.1002/anie.202210362. Epub 2022 Sep 20.

Abstract

Oxetanocin A and albucidin are two oxetane natural products. While the biosynthesis of oxetanocin A has been described, less is known about albucidin. In this work, the albucidin biosynthetic gene cluster is identified in Streptomyces. Heterologous expression in a nonproducing strain demonstrates that the genes alsA and alsB are necessary and sufficient for albucidin biosynthesis confirming a previous study (Myronovskyi et al. Microorganisms 2020, 8, 237). A two-step construction of albucidin 4'-phosphate from 2'-deoxyadenosine monophosphate (2'-dAMP) is shown to be catalyzed in vitro by the cobalamin dependent radical S-adenosyl-l-methionine (SAM) enzyme AlsB, which catalyzes a ring contraction, and the radical SAM enzyme AlsA, which catalyzes elimination of a one-carbon fragment. Isotope labelling studies show that AlsB catalysis begins with stereospecific H-atom transfer of the C2'-pro-R hydrogen from 2'-dAMP to 5'-deoxyadenosine, and that the eliminated one-carbon fragment originates from C3' of 2'-dAMP.

Keywords: Albucidin; Nucleosides; Oxetanes; Radical SAM Enzymes; Ring Contraction.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, N.I.H., Extramural

MeSH terms

  • Antiviral Agents
  • Biological Products*
  • Carbon
  • Ethers, Cyclic
  • Hydrogen
  • Nucleosides
  • Phosphates
  • S-Adenosylmethionine* / metabolism
  • Vitamin B 12 / metabolism

Substances

  • Antiviral Agents
  • Biological Products
  • Ethers, Cyclic
  • Nucleosides
  • Phosphates
  • albucidin
  • Carbon
  • S-Adenosylmethionine
  • Hydrogen
  • oxetane
  • Vitamin B 12