Impact of Nuclear De Novo NAD+ Synthesis via Histone Dynamics on DNA Repair during Cellular Senescence To Prevent Tumorigenesis

Mol Cell Biol. 2022 Nov 17;42(11):e0037922. doi: 10.1128/mcb.00379-22. Epub 2022 Oct 24.

Abstract

NAD+ synthesis is a fundamental process in living cells. The effects of local metabolite production on chromatin influence the epigenetic status of chromatin in DNA metabolism. We have previously shown that K5 acetylation of H2AX by TIP60 is required for the ADP ribosylation activity of PARP-1, for histone H2AX exchange at DNA damage sites. However, the detailed molecular mechanism has remained unclear. Here, we identified de novo NAD synthetase 1 (NAD syn1) as a novel binding partner to H2AX. The enzymatic activity of NAD syn1 is crucial for the ADP ribosylation activity of PARP-1 for the H2AX dynamics at sites of DNA damage. Inhibition of the NAD synthetase activity in the cell nucleus decreased the overall cellular NAD+ concentration, leading to cellular senescence. Accordingly, the acetylation-dependent H2AX dynamics and homologous recombination repair were suppressed, leading to increased tumorigenesis. Our findings have revealed the importance of de novo NAD+ production in the cell nucleus for protection against the decreased DNA repair capacity caused by cellular senescence and thus against tumorigenesis.

Keywords: DNA damage; NAD synthetase 1; TIP60; acetylation; cellular senescence; histone H2AX; tumorigenesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carcinogenesis
  • Cell Nucleus / metabolism
  • Cellular Senescence
  • Chromatin
  • DNA Damage
  • DNA Repair
  • Histones* / metabolism
  • Humans
  • NAD* / metabolism
  • Poly(ADP-ribose) Polymerase Inhibitors

Substances

  • Histones
  • NAD
  • Poly(ADP-ribose) Polymerase Inhibitors
  • Chromatin