Can this data be saved? Techniques for high motion in resting state scans of first grade children

Dev Cogn Neurosci. 2022 Dec:58:101178. doi: 10.1016/j.dcn.2022.101178. Epub 2022 Nov 17.

Abstract

Motion remains a significant technical hurdle in fMRI studies of young children. Our aim was to develop a straightforward and effective method for obtaining and preprocessing resting state data from a high-motion pediatric cohort. This approach combines real-time monitoring of head motion with a preprocessing pipeline that uses volume censoring and concatenation alongside independent component analysis based denoising. We evaluated this method using a sample of 108 first grade children (age 6-8) enrolled in a longitudinal study of math development. Data quality was assessed by analyzing the correlation between participant head motion and two key metrics for resting state data, temporal signal-to-noise and functional connectivity. These correlations should be minimal in the absence of noise-related artifacts. We compared these data quality indicators using several censoring thresholds to determine the necessary degree of censoring. Volume censoring was highly effective at removing motion-corrupted volumes and ICA denoising removed much of the remaining motion artifact. With the censoring threshold set to exclude volumes that exceeded a framewise displacement of 0.3 mm, preprocessed data met rigorous standards for data quality while retaining a large majority of subjects (83 % of participants). Overall, results show it is possible to obtain usable resting-state data despite extreme motion in a group of young, untrained subjects.

Keywords: Artifact; Fmri; Independent component analysis; Motion; Resting-state.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Artifacts
  • Brain / diagnostic imaging
  • Brain Mapping* / methods
  • Child
  • Child, Preschool
  • Humans
  • Image Processing, Computer-Assisted* / methods
  • Longitudinal Studies
  • Magnetic Resonance Imaging / methods
  • Motion