Early Warning Surveillance for SARS-CoV-2 Omicron Variants, United Kingdom, November 2021-September 2022

Emerg Infect Dis. 2023 Jan;29(1):184-188. doi: 10.3201/eid2901.221293. Epub 2022 Dec 1.

Abstract

Since June 2020, the SARS-CoV-2 Immunity and Reinfection Evaluation (SIREN) study has conducted routine PCR testing in UK healthcare workers and sequenced PCR-positive samples. SIREN detected increases in infections and reinfections and delected Omicron subvariant waves emergence contemporaneous with national surveillance. SIREN's sentinel surveillance methods can be used for variant surveillance.

Keywords: BA.1; BA.2; BA.4; BA.5; COVID-19; Omicron variant; SARS; SARS-CoV-2; SIREN study; United Kingdom; coronavirus; coronavirus disease; respiratory infections; severe acute respiratory syndrome coronavirus 2; viruses; zoonoses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • COVID-19* / diagnosis
  • COVID-19* / epidemiology
  • Health Personnel
  • Humans
  • Reinfection
  • SARS-CoV-2 / genetics
  • United Kingdom / epidemiology
  • Urodela

Supplementary concepts

  • SARS-CoV-2 variants