The p-Arms of Human Acrocentric Chromosomes Play by a Different Set of Rules

Annu Rev Genomics Hum Genet. 2023 Aug 25:24:63-83. doi: 10.1146/annurev-genom-101122-081642. Epub 2023 Feb 28.

Abstract

The p-arms of the five human acrocentric chromosomes bear nucleolar organizer regions (NORs) comprising ribosomal gene (rDNA) repeats that are organized in a homogeneous tandem array and transcribed in a telomere-to-centromere direction. Precursor ribosomal RNA transcripts are processed and assembled into ribosomal subunits, the nucleolus being the physical manifestation of this process. I review current understanding of nucleolar chromosome biology and describe current exploration into a role for the NOR chromosomal context. Full DNA sequences for acrocentric p-arms are now emerging, aided by the current revolution in long-read sequencing and genome assembly. Acrocentric p-arms vary from 10.1 to 16.7 Mb, accounting for ∼2.2% of the genome. Bordering rDNA arrays, distal junctions, and proximal junctions are shared among the p-arms, with distal junctions showing evidence of functionality. The remaining p-arm sequences comprise multiple satellite DNA classes and segmental duplications that facilitate recombination between heterologous chromosomes, which is likely also involved in Robertsonian translocations.

Keywords: Robertsonian translocation; heterochromatin; nucleolar organizer region; nucleolus; recombination; ribosomal genes.

Publication types

  • Review
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Nucleolus / genetics
  • Centromere
  • Chromosomes
  • Chromosomes, Human* / genetics
  • DNA, Ribosomal / genetics
  • Humans
  • Nucleolus Organizer Region*

Substances

  • DNA, Ribosomal