Adaptation of the Porcine Pituitary Transcriptome, Spliceosome and Editome during Early Pregnancy

Int J Mol Sci. 2023 Mar 21;24(6):5946. doi: 10.3390/ijms24065946.

Abstract

The physiological mechanisms of the porcine reproduction are relatively well-known. However, transcriptomic changes and the mechanisms accompanying transcription and translation processes in various reproductive organs, as well as their dependence on hormonal status, are still poorly understood. The aim of this study was to gain a principal understanding of alterations within the transcriptome, spliceosome and editome occurring in the pituitary of the domestic pig (Sus scrofa domestica L.), which controls basic physiological processes in the reproductive system. In this investigation, we performed extensive analyses of data obtained by high-throughput sequencing of RNA from the gilts' pituitary anterior lobes during embryo implantation and the mid-luteal phase of the estrous cycle. During analyses, we obtained detailed information on expression changes of 147 genes and 43 long noncoding RNAs, observed 784 alternative splicing events and also found the occurrence of 8729 allele-specific expression sites and 122 RNA editing events. The expression profiles of the selected 16 phenomena were confirmed by PCR or qPCR techniques. As a final result of functional meta-analysis, we acquired knowledge regarding intracellular pathways that induce changes in the processes accompanying transcription and translation regulation, which may induce modifications in the secretory activity of the porcine adenohypophyseal cells.

Keywords: RNA editing; RNA-Seq; adenohypophysis; allele-specific expression; alternative splicing; genes expression; lncRNA; pig; pituitary gland; transcriptome.

Publication types

  • Meta-Analysis

MeSH terms

  • Animals
  • Embryo Implantation
  • Female
  • Gene Expression Profiling
  • Pituitary Gland / metabolism
  • Pregnancy
  • Spliceosomes* / genetics
  • Swine
  • Transcriptome*

Grants and funding

This research was financially supported by the National Science Centre of Poland (Project no.: 2018/31/N/NZ2/02655).