The low ionic strength form of the sodium salt of poly(dm5C-dG) is a B DNA

Nucleic Acids Res. 1986 Apr 25;14(8):3515-9. doi: 10.1093/nar/14.8.3515.

Abstract

The low-salt Z form of poly(dm5C-dG) reported in the literature was shown to be due to minute amounts of bivalent cations. If the polymer was purified by dialysis against 1 mM EDTA, poly(dm5C-dG) showed the normal B form. No change in this B form was observed up to 0.8 M NaCl. Very small amounts of Mg2+ or Ca2+ (10(-6) to 10(-5) M) induced the characteristic Z form CD spectrum, which could easily and rapidly be reverted to B-DNA by addition of EDTA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Circular Dichroism
  • DNA*
  • Kinetics
  • Nucleic Acid Conformation*
  • Osmolar Concentration
  • Polydeoxyribonucleotides
  • Sodium
  • Spectrophotometry, Ultraviolet

Substances

  • Polydeoxyribonucleotides
  • DNA
  • Sodium