Women's contribution in understanding how topoisomerases, supercoiling, and transcription control genome organization

Front Mol Biosci. 2023 Mar 27:10:1155825. doi: 10.3389/fmolb.2023.1155825. eCollection 2023.

Abstract

One of the biggest paradoxes in biology is that human genome is roughly 2 m long, while the nucleus containing it is almost one million times smaller. To fit into the nucleus, DNA twists, bends and folds into several hierarchical levels of compaction. Still, DNA has to maintain a high degree of accessibility to be readily replicated and transcribed by proteins. How compaction and accessibility co-exist functionally in human cells is still a matter of debate. Here, we discuss how the torsional stress of the DNA helix acts as a buffer, regulating both chromatin compaction and accessibility. We will focus on chromatin supercoiling and on the emerging role of topoisomerases as pivotal regulators of genome organization. We will mainly highlight the major breakthrough studies led by women, with the intention of celebrating the work of this group that remains a minority within the scientific community.

Keywords: genome organization; supercoiling; topoisomerases; transcription; women.

Grants and funding

We acknowledge the support from the European Union’s Horizon 2020 Research and Innovation Programme [CellViewer no. 686637 and Ecabox no. 964342 to MPC]; Ministerio de Ciencia e Innovación [grant no. 008506-PID2020- 114080 GB-I00 to MPC], and an AGAUR grant from Secretaria d’Universitats i Recerca del Departament d’Empresa iConeixement de la Generalitat de Catalunya (grant no. 006712 BFU 2017-86760-P (AEI/FEDER, UE) to MPC); ICREA (Institució Catalana de Recerca i Estudis Avançats) [to MPC]; The National Natural Science Foundation of China [grants no. 31971177 and 32270577 to MPC]; Innovative Team Program of Guangzhou Regenerative Medicine and Health Guangdong Laboratory [2018GZR110103001 to MPC]; Guangzhou Key Projects of Brain Science and Brain-Like Intelligence Technology [grant no. 20200730009 to MPC]; Centro de Excelencia Severo Ochoa [grants no. CEX 2020-001049-S, MCIN/AEI/10.13039/501100011033 to CRG]; CERCA Programme/Generalitat de Catalunya [to CRG]; The Spanish Ministry of Science and Innovation to the EMBL partnership [to MPC]; Fundació La Marató de TV3 [grant no. 202027-10 to MPC]; The Barcelona Institute of Science and Technology (BIST) Ignite Grants [Seeding Stage 2017 and Second Phase 2018, to MVN]; The People Program (Marie Curie Actions) FP7/2007–2013 under REA [grant no. 608959 to MVN]; Juan de la Cierva-Incorporación 2017 [to MVN]; Grant for the recruitment of early-stage research staff FI-2020 [Operational Program of Catalonia 2014-2020 CCI grant no. 2014ES05SFOP007 of the European Social Fund to LM] and La Caixa’ Foundation fellowship [grant no. LCF/BQ/DR20/11790016 to LM].