Odontohypophosphatasia caused by a novel combination of two heterozygous variants: a case report

J Clin Pediatr Dent. 2023 Jul;47(4):111-115. doi: 10.22514/jocpd.2023.041. Epub 2023 Jul 3.

Abstract

Hypophosphatasia (HPP) is a rare genetic disorder mainly characterized by skeletal dysplasia that results from a deficiency in tissue-nonspecific alkaline phosphatase (TNSALP), which is encoded by the alkaline phosphatase (ALPL) gene. Odontohypophosphatasia (odonto-HPP) is a mild form of HPP characterized by oral symptoms, such as premature loss of primary teeth. This study was to describe a 4-year-old boy with premature loss of primary teeth who was diagnosed with odonto-HPP. X-ray radiography and laboratory examinations were performed for the diagnosis. Genetic etiology was revealed by whole-exome sequencing. A novel combination of two variants in the ALPL gene was identified in this case; this combination resulted in the odonto-HPP phenotype. c.346G>A (p.Ala116Thr) was inherited from the proband's father, whereas c.1563C>G (p.Ser521Arg) was inherited from the proband's mother. The proband's 8-year-old sister was a heterozygous carrier of c.346G>A (p.Ala116Thr) in the ALPL gene. Thus far, the proband's sister has been asymptomatic. Our findings indicate that c.346G>A is a pathogenic genetic alteration; c.1563C>G might cause a predisposition to the dental phenotype in combination with c.346G>A. It is important for pediatric dentists to consider a diagnosis of odonto-HPP in children with premature loss of primary teeth.

Keywords: ALPL; Heterozygous missense variants; Odontohypophosphatasia; Premature loss of primary teeth.

Publication types

  • Case Reports

MeSH terms

  • Alkaline Phosphatase / genetics
  • Humans
  • Hypophosphatasia* / genetics
  • Hypophosphatasia* / pathology
  • Mutation
  • Tooth Demineralization* / genetics

Substances

  • Alkaline Phosphatase

Supplementary concepts

  • Odontohypophosphatasia