Enhanced activity of Candida antarctica lipase B in cholinium aminoate ionic liquids: a combined experimental and computational analysis

J Biomol Struct Dyn. 2024;42(21):11351-11365. doi: 10.1080/07391102.2023.2262590. Epub 2023 Oct 3.

Abstract

As a class of ionic liquids with higher biocompatibility, cholinium aminoates ([Cho][AA]) hold potential as solvation media for enzymatic bioprocessing. Herein, solvation effect of [Cho][AA] on structural stability and enzymatic activity of Candida antarctica lipase B (CALB) was evaluated using experimental and computational approaches. Influence of [Cho][AA] on CALB stability was investigated using amino acid anions ([AA]-) with varying hydrophobicity levels. Choline phenylalaninate ([Cho][Phe]) resulted in 109.1% and 110.4% of relative CALB activity to buffer medium at 25 °C and 50 °C, respectively. Simulation results revealed the improvement of CALB's enzymatic activities by [AA]- with a strong hydrophobic character. Shielding of CALB from water molecules by [AA]- was observed. The level of CALB activity was governed by accumulation level of [AA]- at CALB's first hydration layer. The stronger interaction between His224 and Asp187 was postulated to be driven by [Cho][AA], resulting in the activity enhancement of CALB. The slight improvement of CALB activity in 0.05 M [Cho][Phe] at 50 °C could be due to the larger size of entrance to the catalytic site and the stronger interaction between the catalytic residues. The promising effect of [Cho][Phe] on CALB activation may stimulate research efforts in designing a 'fully green' bioreaction for various industrial applications.Communicated by Ramaswamy H. Sarma.

Keywords: CALB; choline phenylalaninate; conformational changes; enzyme activation; molecular dynamic simulation.

MeSH terms

  • Choline / chemistry
  • Enzyme Stability
  • Fungal Proteins* / chemistry
  • Fungal Proteins* / metabolism
  • Hydrophobic and Hydrophilic Interactions
  • Ionic Liquids* / chemistry
  • Lipase* / chemistry
  • Lipase* / metabolism
  • Models, Molecular
  • Molecular Dynamics Simulation

Substances

  • Lipase
  • Ionic Liquids
  • lipase B, Candida antarctica
  • Fungal Proteins
  • Choline