NMR 1H, 13C, 15N backbone resonance assignments of wild-type human K-Ras and its oncogenic mutants G12D and G12C bound to GTP

Biomol NMR Assign. 2024 Jun;18(1):7-13. doi: 10.1007/s12104-023-10162-2. Epub 2023 Nov 10.

Abstract

Human K-Ras protein, which is a member of the GTPase Ras family, hydrolyzes GTP to GDP and concomitantly converts from its active to its inactive state. It is a key oncoprotein, because several mutations, particularly those at residue position 12, occur with a high frequency in a wide range of human cancers. The K-Ras protein is therefore an important target for developing therapeutic anti-cancer agents. In this work we report the almost complete sequence-specific resonance assignments of wild-type and the oncogenic G12C and G12D mutants in the GTP-complexed active forms, including the functionally important Switch I and Switch II regions. These assignments serve as the basis for a comprehensive functional dynamics study of wild-type K-Ras and its G12 mutants.

Keywords: G12D and G12C mutants; GTPase; K-Ras; NMR resonance assignments; NMR spectroscopy.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Guanosine Triphosphate* / metabolism
  • Humans
  • Mutant Proteins / chemistry
  • Mutation*
  • Nitrogen Isotopes
  • Nuclear Magnetic Resonance, Biomolecular*
  • Protein Binding
  • Proto-Oncogene Proteins p21(ras)* / chemistry
  • Proto-Oncogene Proteins p21(ras)* / genetics
  • Proto-Oncogene Proteins p21(ras)* / metabolism

Substances

  • Guanosine Triphosphate
  • Proto-Oncogene Proteins p21(ras)
  • KRAS protein, human
  • Mutant Proteins
  • Nitrogen-15
  • Nitrogen Isotopes