Parkinson's Disease Diagnosis Using miRNA Biomarkers and Deep Learning

Front Biosci (Landmark Ed). 2024 Jan 12;29(1):4. doi: 10.31083/j.fbl2901004.

Abstract

Background: The current standard for Parkinson's disease (PD) diagnosis is often imprecise and expensive. However, the dysregulation patterns of microRNA (miRNA) hold potential as a reliable and effective non-invasive diagnosis of PD.

Methods: We use data mining to elucidate new miRNA biomarkers and then develop a machine-learning (ML) model to diagnose PD based on these biomarkers.

Results: The best-performing ML model, trained on filtered miRNA dysregulated in PD, was able to identify miRNA biomarkers with 95.65% accuracy. Through analysis of miRNA implicated in PD, thousands of descriptors reliant on gene targets were created that can be used to identify novel biomarkers and strengthen PD diagnosis.

Conclusions: The developed ML model based on miRNAs and their genomic pathway descriptors achieved high accuracies for the prediction of PD.

Keywords: Parkinson's disease; deep learning; machine learning; miRNA biomarkers; neural networks.

MeSH terms

  • Biomarkers
  • Deep Learning*
  • Humans
  • Machine Learning
  • MicroRNAs* / genetics
  • MicroRNAs* / metabolism
  • Parkinson Disease* / diagnosis
  • Parkinson Disease* / genetics
  • Parkinson Disease* / metabolism

Substances

  • MicroRNAs
  • Biomarkers