DNA methylation marker identification and poly-methylation risk score in prediction of healthspan termination

Epigenomics. 2024 Apr;16(7):461-472. doi: 10.2217/epi-2023-0343. Epub 2024 Mar 14.

Abstract

Aim: To elucidate the epigenetic consequences of DNA methylation in healthspan termination (HST), considering the current limited understanding. Materials & methods: Genetically predicted DNA methylation models were established (n = 2478). These models were applied to genome-wide association study data on HST. Then, a poly-methylation risk score (PMRS) was established in 241,008 individuals from the UK Biobank. Results: Of the 63,046 CpGs from the prediction models, 13 novel CpGs were associated with HST. Furthermore, people with high PMRSs showed higher HST risk (hazard ratio: 1.18; 95% CI: 1.13-1.25). Conclusion: The study indicates that DNA methylation may influence HST by regulating the expression of genes (e.g., PRMT6, CTSK). PMRSs have a promising application in discriminating subpopulations to facilitate early prevention.

Keywords: DNA methylation; epigenetic effects; epigenetic mechanisms; epigenetics and disease; healthspan termination; methylation risk scores.

MeSH terms

  • CpG Islands
  • DNA Methylation*
  • Epigenesis, Genetic*
  • Genetic Markers
  • Genome-Wide Association Study
  • Humans
  • Nuclear Proteins
  • Protein-Arginine N-Methyltransferases
  • Risk Factors

Substances

  • Genetic Markers
  • PRMT6 protein, human
  • Nuclear Proteins
  • Protein-Arginine N-Methyltransferases