Structured and disordered regions of Ataxin-2 contribute differently to the specificity and efficiency of mRNP granule formation

PLoS Genet. 2024 May 20;20(5):e1011251. doi: 10.1371/journal.pgen.1011251. eCollection 2024 May.

Abstract

Ataxin-2 (ATXN2) is a gene implicated in spinocerebellar ataxia type II (SCA2), amyotrophic lateral sclerosis (ALS) and Parkinsonism. The encoded protein is a therapeutic target for ALS and related conditions. ATXN2 (or Atx2 in insects) can function in translational activation, translational repression, mRNA stability and in the assembly of mRNP-granules, a process mediated by intrinsically disordered regions (IDRs). Previous work has shown that the LSm (Like-Sm) domain of Atx2, which can help stimulate mRNA translation, antagonizes mRNP-granule assembly. Here we advance these findings through a series of experiments on Drosophila and human Ataxin-2 proteins. Results of Targets of RNA Binding Proteins Identified by Editing (TRIBE), co-localization and immunoprecipitation experiments indicate that a polyA-binding protein (PABP) interacting, PAM2 motif of Ataxin-2 may be a major determinant of the mRNA and protein content of Ataxin-2 mRNP granules. Experiments with transgenic Drosophila indicate that while the Atx2-LSm domain may protect against neurodegeneration, structured PAM2- and unstructured IDR- interactions both support Atx2-induced cytotoxicity. Taken together, the data lead to a proposal for how Ataxin-2 interactions are remodelled during translational control and how structured and non-structured interactions contribute differently to the specificity and efficiency of RNP granule condensation as well as to neurodegeneration.

MeSH terms

  • Amyotrophic Lateral Sclerosis / genetics
  • Amyotrophic Lateral Sclerosis / metabolism
  • Animals
  • Animals, Genetically Modified
  • Ataxin-2* / genetics
  • Ataxin-2* / metabolism
  • Cytoplasmic Granules / genetics
  • Cytoplasmic Granules / metabolism
  • DNA-Binding Proteins
  • Drosophila Proteins* / genetics
  • Drosophila Proteins* / metabolism
  • Drosophila melanogaster* / genetics
  • Drosophila melanogaster* / metabolism
  • Humans
  • Intrinsically Disordered Proteins / genetics
  • Intrinsically Disordered Proteins / metabolism
  • Nerve Tissue Proteins / genetics
  • Nerve Tissue Proteins / metabolism
  • Poly(A)-Binding Proteins / genetics
  • Poly(A)-Binding Proteins / metabolism
  • Protein Biosynthesis
  • RNA, Messenger* / genetics
  • RNA, Messenger* / metabolism
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism
  • Ribonucleoproteins* / genetics
  • Ribonucleoproteins* / metabolism

Substances

  • Ataxin-2
  • messenger ribonucleoprotein
  • Ribonucleoproteins
  • Drosophila Proteins
  • RNA, Messenger
  • ATXN2 protein, human
  • Poly(A)-Binding Proteins
  • ATX2 protein, Drosophila
  • TBPH protein, Drosophila
  • RNA-Binding Proteins
  • Intrinsically Disordered Proteins
  • Nerve Tissue Proteins
  • DNA-Binding Proteins