A high-quality chromosome-level genome assembly of Ficus hirta

Sci Data. 2024 May 22;11(1):526. doi: 10.1038/s41597-024-03376-z.

Abstract

Ficus species (Moraceae) play pivotal roles in tropical and subtropical ecosystems. Thriving across diverse habitats, from rainforests to deserts, they harbor a multitude of mutualistic and antagonistic interactions with insects, nematodes, and pathogens. Despite their ecological significance, knowledge about the genomic background of Ficus remains limited. In this study, we report a chromosome-level reference genome of F. hirta, with a total size of 297.27 Mb, containing 28,625 protein-coding genes and 44.67% repeat sequences. These findings illuminate the genetic basis of Ficus responses to environmental challenges, offering valuable genomic resources for understanding genome size, adaptive evolution, and co-evolution with natural enemies and mutualists within the genus.

Publication types

  • Dataset

MeSH terms

  • Chromosomes, Plant
  • Ficus* / genetics
  • Genome Size
  • Genome, Plant*