The DNA sequence of the gene (rnc) encoding ribonuclease III of Escherichia coli

Nucleic Acids Res. 1985 Jul 11;13(13):4677-85. doi: 10.1093/nar/13.13.4677.

Abstract

The DNA sequence of a 1,076 base pair BglI-BamHI fragment containing the entire rnc gene for ribonuclease III (RNase III) was determined. An open reading frame of 681 base pairs was found in this region which encodes a protein of 227 amino acid residues (calculated molecular weight = 25,218). When this open reading frame was cloned into a high expression vector, pIN-III, a protein of apparent molecular weight of 26,000 was produced upon induction of the cloned gene. This product accounted for up to 5% of the total cellular protein, and comigrated with purified RNase III. RNase III enzyme activity was induced in parallel with the production of the 26,000 molecular weight protein. A putative promoter was found 170 base pairs upstream from the initiation codon. In the long leader region a very stable stem-bulge-stem structure was found which closely resembles typical RNase III cleavage sites. This structure may be cleaved by RNase III to auto-regulate the expression of the rnc gene.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Base Sequence
  • Codon
  • DNA, Bacterial / analysis*
  • Endoribonucleases / analysis
  • Endoribonucleases / genetics*
  • Escherichia coli / enzymology
  • Escherichia coli / genetics*
  • Escherichia coli Proteins*
  • Genes, Bacterial*
  • Operon
  • Ribonuclease III

Substances

  • Codon
  • DNA, Bacterial
  • Escherichia coli Proteins
  • Endoribonucleases
  • Ribonuclease III
  • ribonuclease III, E coli

Associated data

  • GENBANK/X02673