Explainable artificial intelligence for LDL cholesterol prediction and classification

Clin Biochem. 2024 Aug:130:110791. doi: 10.1016/j.clinbiochem.2024.110791. Epub 2024 Jul 6.

Abstract

Introduction: Monitoring LDL-C levels is essential in clinical practice because there is a direct relation between low-density lipoprotein cholesterol (LDL-C) levels and atherosclerotic heart disease risk. Therefore, measurement or estimate of LDL-C is critical. The present study aims to evaluate Artificial Intelligence (AI) and Explainable AI (XAI) methodologies in predicting LDL-C levels while emphasizing the interpretability of these predictions.

Materials and methods: We retrospectively reviewed data from the Laboratory Information System (LIS) of Ankara Etlik City Hospital (AECH). We included 60.217 patients with standard lipid profiles (total cholesterol [TC], high-density lipoprotein cholesterol, and triglycerides) paired with same-day direct LDL-C results. AI methodologies, such as Gradient Boosting (GB), Random Forests (RF), Support Vector Machines (SVM), and Decision Trees (DT), were used to predict LDL-C and compared directly measured and calculated LDL-C with formulas. XAI techniques such as Shapley additive annotation (SHAP) and locally interpretable model-agnostic explanation (LIME) were used to interpret AI models and improve their explainability.

Results: Predicted LDL-C values using AI, especially RF or GB, showed a stronger correlation with direct measurement LDL-C values than calculated LDL-C values with formulas. TC was shown to be the most influential factor in LDL-C prediction using SHAP and LIME. The agreement between the treatment groups based on NCEP ATPIII guidelines according to measured LDL-C and the LDL-C groups obtained with AI was higher than that obtained with formulas.

Conclusions: It can be concluded that AI is not only a reliable method but also an explainable method for LDL-C estimation and classification.

Keywords: Artificial intelligence; Cardiovascular diseases; Explainable artificial intelligence; LDL cholesterol.

MeSH terms

  • Adult
  • Aged
  • Artificial Intelligence*
  • Cholesterol, LDL* / blood
  • Female
  • Humans
  • Male
  • Middle Aged
  • Retrospective Studies
  • Support Vector Machine

Substances

  • Cholesterol, LDL