Inhibition of RAN attenuates influenza a virus replication and nucleoprotein nuclear export

Emerg Microbes Infect. 2024 Dec;13(1):2387910. doi: 10.1080/22221751.2024.2387910. Epub 2024 Aug 12.

Abstract

Nuclear export of the viral ribonucleoprotein (vRNP) is a critical step in the influenza A virus (IAV) life cycle and may be an effective target for the development of anti-IAV drugs. The host factor ras-related nuclear protein (RAN) is known to participate in the life cycle of several viruses, but its role in influenza virus replication remains unknown. In the present study, we aimed to determine the function of RAN in influenza virus replication using different cell lines and subtype strains. We found that RAN is essential for the nuclear export of vRNP, as it enhances the binding affinity of XPO1 toward the viral nuclear export protein NS2. Depletion of RAN constrained the vRNP complex in the nucleus and attenuated the replication of various subtypes of influenza virus. Using in silico compound screening, we identified that bepotastine could dissociate the RAN-XPO1-vRNP trimeric complex and exhibit potent antiviral activity against influenza virus both in vitro and in vivo. This study demonstrates the important role of RAN in IAV replication and suggests its potential use as an antiviral target.

Keywords: Influenza A virus; RAN; bepotastine; nuclear export; viral ribonucleoprotein.

MeSH terms

  • A549 Cells
  • Active Transport, Cell Nucleus*
  • Animals
  • Antiviral Agents* / pharmacology
  • Cell Line
  • Cell Nucleus / metabolism
  • Dogs
  • Exportin 1 Protein*
  • HEK293 Cells
  • Humans
  • Influenza A virus* / drug effects
  • Influenza A virus* / physiology
  • Influenza, Human / virology
  • Karyopherins* / antagonists & inhibitors
  • Karyopherins* / metabolism
  • Madin Darby Canine Kidney Cells
  • Mice
  • Nucleoproteins / genetics
  • Nucleoproteins / metabolism
  • Piperidines / pharmacology
  • Receptors, Cytoplasmic and Nuclear / genetics
  • Receptors, Cytoplasmic and Nuclear / metabolism
  • Ribonucleoproteins / genetics
  • Ribonucleoproteins / metabolism
  • Viral Nonstructural Proteins / genetics
  • Viral Nonstructural Proteins / metabolism
  • Virus Replication* / drug effects
  • ran GTP-Binding Protein* / genetics
  • ran GTP-Binding Protein* / metabolism

Substances

  • ran GTP-Binding Protein
  • Antiviral Agents
  • Exportin 1 Protein
  • Karyopherins
  • Receptors, Cytoplasmic and Nuclear
  • RAN protein, human
  • Viral Nonstructural Proteins
  • Piperidines
  • NS2 protein, influenza virus A
  • Nucleoproteins
  • Ribonucleoproteins

Grants and funding

This work was supported by National Key Research and Development Program of China: [grant no 2022YFC2305101]; National Natural Science Fundation of China: [grant no 31820103015].