Clinicopathological characteristics and genetic features of young and senior Ewing sarcoma patients

Diagn Pathol. 2024 Sep 16;19(1):124. doi: 10.1186/s13000-024-01548-4.

Abstract

Background: Ewing sarcoma (EwS) is a highly malignant and heterogeneous tumor. Exploring clinicopathological characteristics and genetic features of EwS is critical for prognosis and treatment regimen.

Methods: Clinicopathological characteristics and genetic features of young (≤ 30y) and senior (> 30y) EwS patients were analyzed based on histology, phenotype, and next-generation sequencing (NGS) detection.

Results: The young group (18/36) presented nontypical EwS histological morphology, whereas the senior group (18/36) presented typical morphology. The prognosis of the young group was found to be worse compared with the senior group for patients without metastasis at the initial diagnosis. DNA- and RNA-based NGS was conducted on 20 extraosseous EwS patients. 16/20 samples demonstrated EWSR1-FLI1 fusion and 4/20 demonstrated EWSR1-ERG fusion. However, 13/16 EWSR1-FLI1fusions were detected both in DNA- and RNA-based NGS, 1/16 was detected only at the DNA level, and 2/16 were detected only at the RNA level. An analysis of the genetic profiles of the EWSR1-FLI1 cases revealed that the young group was inclined to couple with more copy number variations (CNV), such as CCND1, CDK4 amplification, and fusion variations, such as CHEK1-EWSR1, SLIT2-EWSR1, and EWSR1-FAM76B fusion. The senior group was more likely to have SNV or Indel mutations, such as EPHA3 and STAG2 mutations. Moreover, patients with more CNV abnormalities had a worse prognosis than those with predominantly SNP variants. In addition, compared with the senior group, the young group had significantly higher CyclinD1 protein expression.

Conclusion: Clinicopathological characteristics and genetic features in young and senior EwS patients differed significantly. Targeting cell cycle dysregulation based on age subgroup may be a potential therapeutic strategy for Ewing sarcoma.

Keywords: CNV; Cell cycle; EWSR1-FLI1; Ewing sarcoma; Prognosis.

MeSH terms

  • Adolescent
  • Adult
  • Age Factors
  • Biomarkers, Tumor / genetics
  • Bone Neoplasms* / genetics
  • Bone Neoplasms* / pathology
  • Child
  • Child, Preschool
  • DNA Copy Number Variations
  • Female
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Male
  • Middle Aged
  • Mutation
  • Oncogene Proteins, Fusion* / genetics
  • Phenotype
  • Prognosis
  • Proto-Oncogene Protein c-fli-1 / genetics
  • RNA-Binding Protein EWS / genetics
  • Sarcoma, Ewing* / genetics
  • Sarcoma, Ewing* / pathology
  • Young Adult

Substances

  • Oncogene Proteins, Fusion
  • RNA-Binding Protein EWS
  • Biomarkers, Tumor
  • EWSR1-FLI1 fusion protein, human
  • Proto-Oncogene Protein c-fli-1