Performance of the VITEK® MS system for the identification of filamentous fungi in a microbiological laboratory in Chile

PLoS One. 2024 Dec 23;19(12):e0315690. doi: 10.1371/journal.pone.0315690. eCollection 2024.

Abstract

Filamentous fungi are an emergent cause of severe infections in immunocompromised patients. Timely and accurate identification is crucial to initiate appropriate therapy. Traditional identification methods are time-consuming, labor-intensive, and operator-dependent. Matrix-assisted laser desorption/ionization-time-of-flight (MALDI-TOF) mass spectrometry is a rapid and easy-to-perform identification method. The effectiveness of a commercial MALDI-TOF MS platform to identify filamentous fungi in a clinical laboratory was evaluated. The study included 67 fungal isolates from 35 species/species complexes, which were identified and confirmed in mycology reference laboratories; 32 derived from clinical samples, 34 from strain collections and one was an ATCC strain. The study used the VITEK® MS system (v3.2.0 database), after sample extraction by VITEK® MS Mould Kit. Results were classified as "correct species", "correct species complex", "correct genus"and "no identification". VITEK® MS correctly identified 91.0% of isolates (58.2% to species, 29.9% to species complex, and 1.5% to genus level only). In 82%, the result matched the species/species complex identified by reference methods. No misidentifications were observed. The kit was rapid and easy to use. In conclusion, the VITEK® MS system showed a high capability to accurately identify filamentous fungi in a clinical laboratory.

MeSH terms

  • Chile
  • Fungi* / classification
  • Fungi* / isolation & purification
  • Humans
  • Laboratories
  • Mycoses / diagnosis
  • Mycoses / microbiology
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization* / methods

Grants and funding

The author(s) received no specific funding for this work.