Orthogonalized human protease control of secreted signals

Nat Chem Biol. 2025 Sep;21(9):1351-1360. doi: 10.1038/s41589-024-01831-x. Epub 2025 Jan 15.

Abstract

Synthetic circuits that regulate protein secretion in human cells could support cell-based therapies by enabling control over local environments. Although protein-level circuits enable such potential clinical applications, featuring orthogonality and compactness, their non-human origin poses a potential immunogenic risk. In this study, we developed Humanized Drug Induced Regulation of Engineered CyTokines (hDIRECT) as a platform to control cytokine activity exclusively using human-derived proteins. We sourced a specific human protease and its FDA-approved inhibitor. We engineered cytokines (IL-2, IL-6 and IL-10) whose activities can be activated and abrogated by proteolytic cleavage. We used species specificity and re-localization strategies to orthogonalize the cytokines and protease from the human context that they would be deployed in. hDIRECT should enable local cytokine activation to support a variety of cell-based therapies, such as muscle regeneration and cancer immunotherapy. Our work offers a proof of concept for the emerging appreciation of humanization in synthetic biology for human health.

MeSH terms

  • Cytokines* / genetics
  • Cytokines* / metabolism
  • Humans
  • Interleukin-10 / genetics
  • Interleukin-10 / metabolism
  • Interleukin-2 / genetics
  • Interleukin-2 / metabolism
  • Interleukin-6 / genetics
  • Interleukin-6 / metabolism
  • Peptide Hydrolases* / metabolism
  • Protease Inhibitors / chemistry
  • Protease Inhibitors / pharmacology
  • Protein Engineering
  • Proteolysis

Substances

  • Peptide Hydrolases
  • Cytokines
  • Interleukin-6
  • Interleukin-2
  • Interleukin-10
  • Protease Inhibitors