Forest Soil pH and Dissolved Organic Matter Aromaticity Are Distinct Drivers for Soil Microbial Community and Carbon Metabolism Potential

Microb Ecol. 2025 Jan 27;87(1):177. doi: 10.1007/s00248-025-02493-5.

Abstract

The ecological niche separation of microbial interactions in forest ecosystems is critical to maintaining ecological balance and biodiversity and has yet to be comprehensively explored in microbial ecology. This study investigated the impacts of soil properties on microbial interactions and carbon metabolism potential in forest soils across 67 sites in China. Using redundancy analysis and random forest models, we identified soil pH and dissolved organic matter (DOM) aromaticity as the primary drivers of microbial interactions, representing abiotic conditions and resource niches, respectively. Our network comparison results highlighted significant differences in microbial interactions between acidic and non-acidic soils, suggesting the critical influences of abiotic conditions on microbial interactions. Conversely, abiotic resource niches played a more pivotal role in shaping the carbon metabolism of soil microbes, supporting the concept that resource niche-based processes drive microbial carbon cycling. Additionally, we demonstrated that microbial interactions contributed significantly to ecosystem function stability and served as potential ecological indicators of microbial functional resilience under environmental stress. These insights emphasize the critical need to preserve microbial interactions for effective forest ecosystem management and projection of ecological outcomes in response to future environmental changes.

Keywords: Carbon metabolic function; Chinese forest soil; Dissolved organic matter; Ecological niche; Microbial co-occurrence.

MeSH terms

  • Bacteria / classification
  • Bacteria / metabolism
  • Carbon Cycle
  • Carbon* / metabolism
  • China
  • Ecosystem
  • Forests*
  • Hydrogen-Ion Concentration
  • Microbial Interactions
  • Microbiota*
  • Soil Microbiology*
  • Soil* / chemistry

Substances

  • Carbon
  • Soil